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Hi Brent,
The source code is provided. For instance, you can find it here: C:\CSR_uEnergy_SDK-2.6.0.10\otau_demo\source
But it will be slow compared to the equivalent wired reprogramming: on a similar project I worked on a few months ago there was a requirement that no factory operation took longer than 60s so we wrote a customised SPI tool to program, configure, test.
Good luck!
Chris